PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4U54R
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 256aa    MW: 28456.3 Da    PI: 8.6599
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4U54RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46e-1468114354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  +v+++k+L
  Aradu.4U54R  68 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVVDHVKDL 114
                  79*************************8.....7****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.41565114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-1366118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1568117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.24E-1168117No hitNo description
PfamPF000101.2E-1168114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1171120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2605.8E-5154204No hitNo description
CDDcd048731.67E-5158195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MENYYYSGWP QSQCNNSAPN SNNNSSFSVP TQIVPHAYDS AFASLQFQYP WPLAFEGFPE  60
DRAASASKSH SQAEKRRRDR INAQLATLRK LIPKSDKMDK AALLGSVVDH VKDLKRKAMD  120
VSKSITVPSE TDEVTIIECD PDQDESYAKV KILKHNIVIS VCCDDRPELF NELIQVLKGL  180
RLTAVKADIA SVGGRIKSIL VLCSKENEEG GDGVCLNTLK QSLKSAVNKI ASSSMTSNCP  240
TRSKRQRFFL PSHFIQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.4U54R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015931276.10.0transcription factor bHLH51
RefseqXP_025609140.10.0transcription factor bHLH51
TrEMBLA0A445C5B70.0A0A445C5B7_ARAHY; Uncharacterized protein
STRINGXP_007163561.11e-129(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57963351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-47bHLH family protein