PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.52ZWJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 465aa    MW: 54517.3 Da    PI: 4.6415
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.52ZWJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1478.2e-1589166177
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwe 77 
                  +fYn+YA++  Fs rk++++ks + g  + ++fvC  eg+r +++ +  + +r++++etr+gC a++++  +  +g+w+
  Aradu.52ZWJ  89 EFYNRYARTRVFSARKNRTTKS-HAGILKLKNFVCHHEGFRPQNNYSiGNLKRKPTPETRCGCSAMMEICVDApSGRWY 166
                  6*****************9999.778899************999998788999****************9999888885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.3E-1189166IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MGQEFSHEGV NSEHTSYNQY EQEEEKHEEV DVDYMDEDDT NVEPMFDYVG FDEGYNIDSL  60
EDIRIIEFWN IRDEDVCHFH FSNVDIAFEF YNRYARTRVF SARKNRTTKS HAGILKLKNF  120
VCHHEGFRPQ NNYSIGNLKR KPTPETRCGC SAMMEICVDA PSGRWYNLVE FIQHFNCCID  180
HIRWKEVQAD LASVNERPKR SAANVNTLSI FHMFQPILLR VASMKVINMR QTGSYVIYSI  240
DLDRMSNEMW CVFCCDNEME FNCSCMRMES FVCVLVHEDI EELPRSLVLP QWTKTAKVGL  300
QNADGLHWDS LMLSQYGCLM DWFRKLANFA CRDNERFIFT REMAMNLLKQ FKEEDTAQKE  360
LVNDADIVRD GRGNDTFDND SDDHMNIEDD SLVYDESASY SSNEVLLYYA RFFAVEHTGA  420
GLFSRKCGEY LFVALYKALM RQEELLAYID SQEEARLRVS CLKSF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.52ZWJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016173020.11e-139protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025675341.11e-140protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XLR51e-137A0A444XLR5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1401926
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.18e-08FAR1-related sequence 10