PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.573UI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 520aa    MW: 56349.4 Da    PI: 6.285
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.573UIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.3e-09336384355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  Aradu.573UI 336 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 384
                  58*************************9....556*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.86E-11331388No hitNo description
SuperFamilySSF474594.84E-17331402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485333383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16334401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-6336384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-10339389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MGDRENFEVD RDRDRVNYST SMASDWRFGV GNFANSMVDS YVTNFWDHPN SQNLGFCDIN  60
GGSSNMNVIG KDGFGYGRGS HDHRTLEMGW NHASSVLKGD NNAFLPNGPA MLPQSLSQFP  120
SDSGFIERAA RLSCFGAGNS VDMVNSFGIP QSMNLYARIG GTMQGTGDAL LGHGLRSAAL  180
GGQSHKSDPN VVEDAKDDKE MTLQDDKRSE NLAVSHDEGK QALGGSANES DRAESSGRDD  240
SPMLECTSGE PSNKGLSSKK RKRIGLDADK DKVDGSPEQP GAAVKENSGS RQQKGEQQPT  300
PSTKGSGKNA KQGSQASDSP KEEYIHVRAR RGQATNSHSL AERVRREKIS ERMKFLQDLV  360
PGCSKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPR MDFNIEGLLA KEILQQRAGT  420
SSAHGFPPEL SMAFPPLHPS RPGLIHSTLP SMANSSDILR RTLQPNLAHL SGGFKDPNQL  480
PEVWDDELHN VVQMTFPTSA PPSCQDLDGS APSGQTKTEP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.573UI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150432e-39AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952610.10.0transcription factor bHLH49 isoform X2
RefseqXP_025693926.10.0transcription factor bHLH49 isoform X2
RefseqXP_025693934.10.0transcription factor bHLH49 isoform X2
TrEMBLA0A445ALX00.0A0A445ALX0_ARAHY; Uncharacterized protein
STRINGGLYMA02G13860.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72493248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-116bHLH family protein