PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.597SK
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 197aa    MW: 22388.8 Da    PI: 7.8742
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.597SKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.45.6e-14991573491
         FAR1  34 vCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                   C   g++ e+ ++ +++r+++++tr+gC a++++k +  +gkw v++++ +HnHel p
  Aradu.597SK  99 FCDTTGEEIEKLERGDRKREQKVVTRCGCLAEMRIKPNGeTGKWFVSRFVDDHNHELLP 157
                  4888888888888899*********************999****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.2E-1199157IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MVTLRLHMEV LRLVVAGESI GKIVYVRKRS ERRGSGWLKC WVLEEVLVIK MEEDGYDGDS  60
FNQALGNFSK SSEAGLLSAE DVLKLEFGCP KEAILSKGFC DTTGEEIEKL ERGDRKREQK  120
VVTRCGCLAE MRIKPNGETG KWFVSRFVDD HNHELLPKKF VEYLPSYRKV SDVDIAHMDS  180
LRQVGISIPK IYKSFAA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.597SK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997365.13e-53protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YA331e-53A0A444YA33_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.11e-13FAR1-related sequence 11