PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.5CX4U
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 222aa    MW: 25665.5 Da    PI: 6.9648
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.5CX4UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.8e-052274555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                    +E++RR++++  +++L +ll     + + k+    ++ + kA++YIk+L+
  Aradu.5CX4U 22 RRLIEKKRRNHMRMLYSKLNSLLSMdHNSISLKRcHWLIDQVDKAINYIKNLE 74
                 5689*********************4445555556777999*********995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-81588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.8071773IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.76E-41778No hitNo description
Gene3DG3DSA:4.10.280.101.6E-62187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MDQLGSRSEA SPSSTNDKKI ERRLIEKKRR NHMRMLYSKL NSLLSMDHNS ISLKRCHWLI  60
DQVDKAINYI KNLEEKVKMA KEKRESLLGM GRNRTRGAGG LRDLSKPPQL MVHEMGSYLQ  120
IVMTCGLDSQ FIFSEIIRIL NEENIDVKSV KSSLVENSMH HVVHAEISQF LLQLGATKVS  180
ERLKRFVNEP TSEIELQSDH QLLDFEIDTD ELAELLDFLE EK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.5CX4U
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025641085.11e-132transcription factor bHLH162-like
TrEMBLA0A445E0661e-160A0A445E066_ARAHY; Uncharacterized protein
STRINGGLYMA06G44660.21e-69(Glycine max)
STRINGGLYMA12G12880.15e-70(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-16bHLH family protein