PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.5FI5Z

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 633aa MW: 72879.7 Da PI: 7.4737

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.5FI5Z	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.6	2e-13	257	340	7	89
FAR1 7 AkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +++vGF +r+++++ k+++ +++ Cs+eg+re + k+ + r + t +gCkak+ +++ +++w+v+klel+H+H++ Aradu.5FI5Z 257 SYKVGFVTRIRNTNFDktrKESKIPINQSIHCSREGYREFRVKA---ATRVKRITIVGCKAKMYTMLDRqKDNWMVSKLELKHTHPC 340 689****999876644466667799**********999...88888999*****999888*************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.6E-11	257	341	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence Send to blast
MWNEDGIYVS YHFVASYKKD NQQDTARQGG LDCCQERYKV PKSEASPSWS FLIHRDAVIC 60 SIDVDYVFTW SSLLLCGTFQ VIETSPLLFN GDYAFTRILL LLRRTFQVTG TLLLPFYGDC 120 AFTRIPFCCT TRPVEEKCDV SVSRCHATLF SLIISGKVYV SPLKSSGPTT IPVEENCDDH 180 IISMDQSICE EVSYDTAYDV SDHYNFTDVN VLSLSEDDTQ HVDKGKEFVN VIQLEDDAMA 240 VNHELLDHTG ISIEKISYKV GFVTRIRNTN FDKTRKESKI PINQSIHCSR EGYREFRVKA 300 ATRVKRITIV GCKAKMYTML DRQKDNWMVS KLELKHTHPC SAKQLIVHDD LYDDCRIWVP 360 IYFQGEFWAG MRSTQRSESM YAFFGGYLNC KSGLVQVVHE YDNVLGNKEQ KELEDDCADF 420 KGVFPCSSSS TIERQFQHEY TTYKFREVQQ EFRKRMDCLV RGVTQEGDLF RVTVNEQYLL 480 YGEPRSWTYS VEFHPATHKS KNVQQKHTFI KSSHDEKLSG ESHNLFRGLC SHFFNVAQDF 540 VTCKEAAMLH SGLDELRTKL FDYRANLGSK RVPTTQNSMV TQRDPTLGAS DIQCPSKVST 600 TGRPRLKRLG SELDTSIKKF MRRKKKNPPP LYI

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence Send to blast

MWNEDGIYVS YHFVASYKKD NQQDTARQGG LDCCQERYKV PKSEASPSWS FLIHRDAVIC  60
SIDVDYVFTW SSLLLCGTFQ VIETSPLLFN GDYAFTRILL LLRRTFQVTG TLLLPFYGDC  120
AFTRIPFCCT TRPVEEKCDV SVSRCHATLF SLIISGKVYV SPLKSSGPTT IPVEENCDDH  180
IISMDQSICE EVSYDTAYDV SDHYNFTDVN VLSLSEDDTQ HVDKGKEFVN VIQLEDDAMA  240
VNHELLDHTG ISIEKISYKV GFVTRIRNTN FDKTRKESKI PINQSIHCSR EGYREFRVKA  300
ATRVKRITIV GCKAKMYTML DRQKDNWMVS KLELKHTHPC SAKQLIVHDD LYDDCRIWVP  360
IYFQGEFWAG MRSTQRSESM YAFFGGYLNC KSGLVQVVHE YDNVLGNKEQ KELEDDCADF  420
KGVFPCSSSS TIERQFQHEY TTYKFREVQQ EFRKRMDCLV RGVTQEGDLF RVTVNEQYLL  480
YGEPRSWTYS VEFHPATHKS KNVQQKHTFI KSSHDEKLSG ESHNLFRGLC SHFFNVAQDF  540
VTCKEAAMLH SGLDELRTKL FDYRANLGSK RVPTTQNSMV TQRDPTLGAS DIQCPSKVST  600
TGRPRLKRLG SELDTSIKKF MRRKKKNPPP LYI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.5FI5Z

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A445CZR3	0.0	A0A445CZR3_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14126	2	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-13	FAR1-related sequence 5