PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.5N1W2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 123aa    MW: 13736.4 Da    PI: 10.8358
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.5N1W2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like361.6e-11227227
      G2-like  2 prlrWtpeLHerFveaveqLGGsekA 27
                 prl+Wtp+LH +Fv++v++LGG+ek 
  Aradu.5N1W2  2 PRLCWTPNLHLSFVHVVQRLGGQEKS 27
                 8**********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.9E-8128IPR009057Homeodomain-like
SuperFamilySSF530984.86E-737108IPR012337Ribonuclease H-like domain
PfamPF134566.4E-670111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MPRLCWTPNL HLSFVHVVQR LGGQEKSFES AKAISVGASK GVQRLGNQLL MVLQNTKIKL  60
HLRLREGVGI APCNAAEYRA MILGMRYALK KGFSFIRIQG DSKLVCMQFS CIQVTVAQQL  120
LHL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.5N1W2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351881e-37AC235188.1 Glycine max strain Williams 82 clone GM_WBb0010N12, complete sequence.
GenBankAC2353091e-37AC235309.1 Glycine max strain Williams 82 clone GM_WBb0069M12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445B7569e-76A0A445B756_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42660.18e-09G2-like family protein