PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.5S8J3
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 436aa    MW: 49102 Da    PI: 5.2921
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.5S8J3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.92.6e-361112022102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+ye+++d+e++ ++swsen +sf+v++++efak +LpkyFkhsnf+SF+RQLn+YgF+kv++++         weF+++ F+ gkk+ll++i+
   Aradu.5S8J3 111 FLRKTYEMVDDPETDPIVSWSENRDSFIVWESHEFAKVLLPKYFKHSNFSSFIRQLNTYGFRKVDSDR---------WEFANEGFQGGKKHLLKNIR 198
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
   Aradu.5S8J3 199 RRSK 202
                   **87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467851.35E-35107200IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.102.2E-38107200IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004154.7E-60107200IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004475.1E-32111200IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.0E-19111134IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.0E-19149161IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340150174IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.0E-19162174IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MVLLAHAGSG GGQACSPPQF NKAIAEEKPV EMVRVKSEQV TSSCRFLQQN DDVSSDESDK  60
KKSNSEVTEE EEPRVKEEVA DDGAVNVSSS SSSVELPKPM EGLNEAGPPP FLRKTYEMVD  120
DPETDPIVSW SENRDSFIVW ESHEFAKVLL PKYFKHSNFS SFIRQLNTYG FRKVDSDRWE  180
FANEGFQGGK KHLLKNIRRR SKYNKLHQGA FIDPAKPCLE AEVEKLKEDQ NILKLEILKL  240
RQQQESSHVH ISSVQDRIQN VQTKQYQMIY FLTRMARKPA FVEQLLQKIK RKRELDGTDM  300
LKRRRLLEPT PSVDYRCQQG HQQLSTLQSE LDGLLSENVM STSNKIEQTV PSPLEGELCN  360
KVQGLRSYGF SRGGDVPSAY HAMTENLLGE NNGGADEELD VNDSNIYLEL EDLITKPTDW  420
VGSASASAGG LVGQTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B2e-24832001129Heat shock factor protein 1
5d5v_B2e-24832001129Heat shock factor protein 1
5d5v_D2e-24832001129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290304RKRELDGTDMLKRRR
2301305KRRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.5S8J3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015973603.10.0heat stress transcription factor A-2 isoform X1
RefseqXP_025605790.10.0heat stress transcription factor A-2 isoform X1
TrEMBLA0A445EP860.0A0A445EP86_ARAHY; Uncharacterized protein
STRINGGLYMA13G16510.11e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106762938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-82heat shock transcription factor A2