PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.5U359
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YB
Protein Properties Length: 77aa    MW: 8576.54 Da    PI: 6.7987
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.5U359genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB27.57.2e-091257195
        NF-YB 71 latlGfedyveplkvylkkyreleg 95
                 +atlGfedy+eplkvyl+++re ++
  Aradu.5U359  1 MATLGFEDYIEPLKVYLARFREGDT 25
                 89*******************9665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.103.0E-6152IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    Send to blast
MATLGFEDYI EPLKVYLARF REGDTKGSAR TSDGSVRRDQ VGLAGQNTQL VHQGSLNYIS  60
SQVQQQHLVI PSMQSHE
Functional Description ? help Back to Top
Source Description
UniProtComponent of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.5U359
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941015.11e-48nuclear transcription factor Y subunit B-1
RefseqXP_025619810.11e-48nuclear transcription factor Y subunit B-1
RefseqXP_025619811.11e-48nuclear transcription factor Y subunit B-1
SwissprotQ8VYK46e-19NFYB8_ARATH; Nuclear transcription factor Y subunit B-8
TrEMBLA0A445BH333e-47A0A445BH33_ARAHY; Uncharacterized protein
STRINGXP_007144163.11e-40(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2893922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.32e-21nuclear factor Y, subunit B8
Publications ? help Back to Top
  1. Zhao H, et al.
    The Arabidopsis thaliana Nuclear Factor Y Transcription Factors.
    Front Plant Sci, 2016. 7: p. 2045
    [PMID:28119722]