PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.5X8PG

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 234aa MW: 27658.4 Da PI: 7.498

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.5X8PG	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.4	2e-12	81	147	1	67
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklk 67 +fY +Y++ GF +rksk k+ ++ei+++t+vC+++g r+++ + +k+r++++ t++gC l+ Aradu.5X8PG 81 EFYTSYSRLKGFAIRKSKRVKK-AKREIVRYTYVCKRQGLRHKKWLHkLDKKREHKPITQCGCVDFLR 147 6**************98887.7777************998766468888999999999976555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.4E-11	81	148	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence Send to blast
MNNINYEPIS ISTNHESATS DPEDGLLNEE TLFDMSILGD EAGFPNMTQT DIEPQSAQVP 60 SHVSVEDVLM MEFFTPGEAR EFYTSYSRLK GFAIRKSKRV KKAKREIVRY TYVCKRQGLR 120 HKKWLHKLDK KREHKPITQC GCVDFLREKE EELDFHSFYG TPVLQIQFPE IERSATTIYT 180 RELFYRFGET LRRAIRFYIV DCQDCENGCC YVIQKYRRPE STWQVLHQAH NRTF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.5X8PG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016185197.1	2e-81	putative protein FAR1-RELATED SEQUENCE 10
Refseq	XP_025635626.1	2e-81	putative protein FAR1-RELATED SEQUENCE 10
Refseq	XP_025688919.1	4e-80	protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBL	A0A445DHB9	1e-81	A0A445DHB9_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	8e-08	FAR1-related sequence 10