PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.61MYT
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Whirly
Protein Properties Length: 119aa    MW: 13946.4 Da    PI: 11.6053
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.61MYTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly30.85.3e-10691135095
       Whirly  50 ekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                  e+ ++f+ls  e+++++ l+++esc+ffhd  +++  + k++k ++
  Aradu.61MYT  69 ENDEVFSLSMGEMGTVI-LGARESCKFFHDRIKGKRSNTKLKKIFS 113
                  68899*********988.9************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.30.31.106.5E-570112IPR009044ssDNA-binding transcriptional regulator
PfamPF085365.6E-770113IPR013742Plant transcription factor
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MFNILRKNTS LLTHTLKTFF IILHRASNPN PRTSSRFQPL LRCSLHRRSL RLKASVILNI  60
SWFQKRLNEN DEVFSLSMGE MGTVILGARE SCKFFHDRIK GKRSNTKLKK IFSEHLCEI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.61MYT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.14e-10ssDNA-binding transcriptional regulator