PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.630QE
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 98aa    MW: 11391.3 Da    PI: 10.4208
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.630QEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.83.6e-1323823491
         FAR1 34 vCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                   + +gkr+++    ++++r++++ trtgC+a+++v  ++ ++ w+v+kl+++HnH+l+p
  Aradu.630QE 23 EHNAKGKRAKKYIFnSNRKREHKVLTRTGCEAMITVYFDSkTSAWRVEKLVEKHNHDLVP 82
                 4455555555543357899999***************99989***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.3E-112082IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MCVMRGVSGS ESARVIHRME KMEHNAKGKR AKKYIFNSNR KREHKVLTRT GCEAMITVYF  60
DSKTSAWRVE KLVEKHNHDL VPQCLVYLIS NHRGMTEA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.630QE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016195882.12e-38protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025647956.12e-38protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445AQ133e-42A0A445AQ13_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1797925
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-06FAR1-related sequence 5