PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.645U9

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 335aa MW: 38318.2 Da PI: 9.2106

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.645U9	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.2	7.3e-15	149	234	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 Y++Y k +GF +r+ ++ ++ +ei+++ +Cs+egk +++ + +++t+++ +C a++ ++ k g w ++k++l+H+H+++p Aradu.645U9 149 VYRNYTKAAGFFTRVWSTIRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTASLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 234 7************988776..8889*********998877...8999**********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.1E-12	149	234	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
NTRSSTYVDY TRYIICRVYL TSKFKIFVSF FVFVILRFGC SSSRASSLIL LHRSFPLLFS 60 LVCSSFTFSF SLSATRALFS LLICCFLKSK FELVLKMMDP SSSDSVLNPG DVDYEFESNE 120 VPESLSVVDD QFVLKVGMTF TTLEDAGKVY RNYTKAAGFF TRVWSTIRKG NEIKNQLITC 180 SREGKWKSKI SPTEKTNPTA SLNCPARIYI HTLKDVGAWI ISKVVLDHSH PCCPSKAEML 240 KQHRELSMSI RRTIENNEEA AGQVFDISAF LYLSAITTNV PSGKQEQKSE GLPHFNVNET 300 RVGFHPEFSV HFRRYEFPPW VIRKCHALQE LQYKK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.645U9

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-171	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020992539.1	1e-111	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445D283	1e-107	A0A445D283_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	2e-09	FAR1-related sequence 4