PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.64IL2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 365aa    MW: 41795.7 Da    PI: 4.4068
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.64IL2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.53.1e-12118202286
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  W+++ + +L+e+  ++  +l+r++l+  +W +v++k+  e + e+s  qCk+ +++l++rykk+k   ++     s ++++f++++
  Aradu.64IL2 118 WSEHATFVLLEVWGDKFLQLGRTSLRSDDWLDVAEKVsDELKAEKSVAQCKSMLDKLKRRYKKEKGKVEEL-GLGSCKWAFFKKMD 202
                  *************************************88999***********************988875.78889********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.7E-18116204No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MDDMEDDARY PPKSFPLNRQ NPSHRHKHPI RPPPFHHHNP RYEDQEDDDY DDEEEHAEFE  60
NYGNDVVDNT NNEDDDDDCG NGVQNGYFKK RKVGVGGSPV PTGYEFAPRV KYSYGDDWSE  120
HATFVLLEVW GDKFLQLGRT SLRSDDWLDV AEKVSDELKA EKSVAQCKSM LDKLKRRYKK  180
EKGKVEELGL GSCKWAFFKK MDMLMASSTR QEYGLACGVD GGEYVFMNTR VYLSRSNGFD  240
EMRDSPGESE SDEDEDGLDG HGVGVGVASA ARRRSGVGGD GEDEEEEESS FRVLADSIQK  300
FGKIYEKIEN SKRQQMMELE KMRLDFNREL ELQKKQILER AQAEIAKIQD VDEDETDTST  360
ENLSE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176DKLKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.64IL2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966495.10.0trihelix transcription factor ASIL2
RefseqXP_025701045.10.0trihelix transcription factor ASIL2
RefseqXP_025701046.10.0trihelix transcription factor ASIL2
TrEMBLA0A445D2G30.0A0A445D2G3_ARAHY; Uncharacterized protein
STRINGGLYMA09G32130.21e-147(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-74Trihelix family protein