PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.687AB
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 243aa    MW: 27026.9 Da    PI: 7.0353
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.687ABgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.3e-1357103354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+e+ErrRR+riN  +++Lr+++P a      K++Ka+ L ++++++k+L
  Aradu.687AB  57 KNHSEAERRRRARINAHLDTLRTVIPAA-----NKMDKASLLAEVIRHLKEL 103
                  58*************************8.....6****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.85954103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-1356109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-1157103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-1458127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-1260109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.70E-467105No hitNo description
PROSITE profilePS516719.063140225IPR002912ACT domain
SuperFamilySSF550211.47E-5142219No hitNo description
Gene3DG3DSA:3.30.70.2604.8E-6142185No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MEMEGFAASS ERSSGVGGGY ASSSSLVLDR VKGELVEAPV KLERKGVFPE RTIEALKNHS  60
EAERRRRARI NAHLDTLRTV IPAANKMDKA SLLAEVIRHL KELKTNAAQA CQGLMIPKDN  120
DELRVEEQEG GLNGFPYSIR ASLCCEYKPG LLSDIRQALD ALHLMIISAE IATLGGRMKN  180
VFVIISCEEQ SFEDAEYRQF LAGSVHQALR SVLDRFSVSQ DILESRKRRR ISIFSSSSLE  240
DFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225229RKRRR
2226230KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.687AB
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936467.11e-175transcription factor bHLH30
RefseqXP_025614605.11e-175transcription factor bHLH30
TrEMBLA0A445BXN21e-175A0A445BXN2_ARAHY; Uncharacterized protein
STRINGGLYMA12G14400.11e-136(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-30bHLH family protein