PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.6E0QJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 448aa    MW: 49144.3 Da    PI: 6.6161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.6E0QJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-12399444655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR +i +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  Aradu.6E0QJ 399 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKELQ 444
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.332393443IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-15396448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.86E-13397448No hitNo description
Gene3DG3DSA:4.10.280.102.4E-14398448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-10399448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-9399444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MESDLHRHPP MFLDHHHHHH HHHHHQQMNT TTTNNNNNSS GLTRFRSAPS SYFSSIIDKE  60
FYESIFNKPS SPETEKILAR FMNSLANDEP EDDSLLGVAA ATSPTTNNNK NLSPSPQPPQ  120
QVVQQISQVK EEEISINTIN TNNTLQPQPL PSSMNNESLV QQPQQQMNSM SNNNYGSLSG  180
NNPPTQSFYQ SSGRPPLPNQ MKTGRGNASN LIRHGSSPAG LFSNLNLEGY AALRGMGTMG  240
AAASNTSEDA NFSPVARLKN PPTFSSSGLM TPIAEIRSTS NTLNNPESAE AFAESQSSDF  300
MSGLPVGSWD DSSSSMMSDN IAGRKRFRDE DVKPFAGVNA ADTQVKTEAG QAPGTPLAHQ  360
LSMPNTSSEI AAIEKFLQCS DSVVCKIRAK RGCATHPRSI AERVRRTKIS ERMRKLQDLV  420
PNMDKQTNTA DMLDLAVDYI KELQNQVE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.6E0QJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311184e-74KT031118.1 Glycine max clone HN_CCL_179 bHLH transcription factor (Glyma11g13960.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952175.10.0transcription factor bHLH122
RefseqXP_020992984.10.0transcription factor bHLH122
TrEMBLA0A445E4090.0A0A445E409_ARAHY; Uncharacterized protein
STRINGGLYMA12G05930.31e-174(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.12e-49bHLH family protein