PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.6H84M

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 169aa MW: 19382.4 Da PI: 10.4436

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.6H84M	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.4	4e-17	57	143	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++YAk +GFs+r+++++++ +ei+++ +Cs+e k +++ + +++t+++ +C ++ ++ k g w ++k++l+H+H+++p Aradu.6H84M 57 KFYRNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREEKWKSKISP---TEKTNPTAGLNCPTRIYIHTLKdVGAWIISKVVLDHSHSCCP 143 6**************98887..8889*******99998776...8999**********998879************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.1E-14	57	143	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MAKWIMNLNL TKFLRRSGVD QNFLGVFLRE VWPLSVVDDQ FVSKVGMTFT TLEDAGKFYR 60 NYAKAAGFST RVRSTNRKGN EIKNQLITCS REEKWKSKIS PTEKTNPTAG LNCPTRIYIH 120 TLKDVGAWII SKVVLDHSHS CCPSKAEMLK QHRKLSMSIR RTIENNEEA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.6H84M

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	0.0	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997160.1	2e-91	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997362.1	3e-91	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Z0Q8	1e-98	A0A444Z0Q8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-11	FAR1-related sequence 4