PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.6PZ3X

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 499aa MW: 56439.5 Da PI: 4.5244

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.6PZ3X	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.9	4.9e-05	278	316	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+ri +++++Lr+++P + k s Le ++Y++ L Aradu.6PZ3X 278 RQRIQDCIQQLRTIIPGK---DVKECSIDNLLECSIRYMSFL 316 89**************98...666688888888888888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	8.912	265	316	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence Send to blast
MDHNNGLVSK CNGSTKCFTD QDPFFDPLEE QVLYESALTS SCITNNSMEN QHSNQVIMAE 60 EFLDFNSVDD ICQWFDPSQE DNNSNTFVEP MQCDATSFSW KSVMDSYENC LLGSKEPESN 120 LIEPAASSAD DTASFECLSE FDFDVLRVLF SDSSIEEILN CEEAICNPLN NGSSSVLELS 180 SENNKMEMME NISIPMNFTK NLAWFEARNN LTQPVPDSDT TNKIKRKKVQ LGLVMDDSHS 240 IKLGETILLP PRKKEERKKL SKKKDKAGEG SRPRPKDRQR IQDCIQQLRT IIPGKDVKEC 300 SIDNLLECSI RYMSFLSSTA HYANKLQEPD KPKLIEQANG VVLQESSVEG SKHCGTWSFE 360 EPHQTLLCPI IVEDMSHPGQ MLIELLCEEE GFSLEMVDTI KGLGLNILKA KMETRNKKLW 420 ARFIVEANRH VTKIDVFWSL LHLVEQKNSS GTGMDSSTNN NKYCNVMNDS SVSRLDKQQQ 480 EKESCNFFMS MTEALSFSG

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence Send to blast

MDHNNGLVSK CNGSTKCFTD QDPFFDPLEE QVLYESALTS SCITNNSMEN QHSNQVIMAE  60
EFLDFNSVDD ICQWFDPSQE DNNSNTFVEP MQCDATSFSW KSVMDSYENC LLGSKEPESN  120
LIEPAASSAD DTASFECLSE FDFDVLRVLF SDSSIEEILN CEEAICNPLN NGSSSVLELS  180
SENNKMEMME NISIPMNFTK NLAWFEARNN LTQPVPDSDT TNKIKRKKVQ LGLVMDDSHS  240
IKLGETILLP PRKKEERKKL SKKKDKAGEG SRPRPKDRQR IQDCIQQLRT IIPGKDVKEC  300
SIDNLLECSI RYMSFLSSTA HYANKLQEPD KPKLIEQANG VVLQESSVEG SKHCGTWSFE  360
EPHQTLLCPI IVEDMSHPGQ MLIELLCEEE GFSLEMVDTI KGLGLNILKA KMETRNKKLW  420
ARFIVEANRH VTKIDVFWSL LHLVEQKNSS GTGMDSSTNN NKYCNVMNDS SVSRLDKQQQ  480
EKESCNFFMS MTEALSFSG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.6PZ3X

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020998658.1	0.0	transcription factor bHLH157-like
TrEMBL	A0A445EX74	0.0	A0A445EX74_ARAHY; Uncharacterized protein
STRING	GLYMA10G31691.1	1e-112	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6955	16	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-30	conserved peptide upstream open reading frame 7