PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.6VX3K

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 687aa MW: 77651.2 Da PI: 5.3309

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.6VX3K	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.4	0.0006	496	527	20	55
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f L++ +P++ ++K++iL +++Y+k+L+ Aradu.6VX3K 496 FKILKSSIPHP----ISEVEKISILGDTIKYLKELE 527 78899999999....789***************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF14215	5.5E-46	16	226	IPR025610	Transcription factor MYC/MYB N-terminal
Gene3D	G3DSA:4.10.280.10	1.5E-6	489	545	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.66E-5	495	550	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence Send to blast
MASSWSPKHE KMQKSLSTQL AVAVRSVQWS YGIFWAPSTT QEGVLEWREG YYNGDIKTMK 60 TVQTTMEIKN DKIGVQRSEQ LKELYKFLLV GESDPQTKRP SAALSPEDLS DSEWYYLVCM 120 SFVFYPNQSL PGRALEIGET IWLCNAQYAD SKVFSRSLLA KSASIQQKEI LSDHYIMAVT 180 KISMFILCFK PVFQTVVCFP YLGGVIEIGT TELVPEDPNL IQHVKACLLE FSKPICSDKS 240 SSALNKPDDD KLQPCSNGEH VLVDTKVLEY SCSPAEEIKL DQDPIKELQE DSNMDSPDGC 300 SNGCEHNCRV GESMVEAINN GGPSSQVHFM DDDDALSNGA PDSLSSCDCL SEASENRGKA 360 SKDVQLIRGI QSFNHLNRSS LDAAASDEHL SYTRILSALL GRSSAFKQNP YASNSNCKSS 420 FVKWKKGGIC EQNRLRLEQS LLKKTLFTVP LMHRSFSSIK SMKENETKEW TNRLENADDK 480 FRENVLSDKI RETGNFKILK SSIPHPISEV EKISILGDTI KYLKELETRV EELESYMDMA 540 DSEARTKRKC PDMLEQISDN YEARKVYNKG MRKPWMMNKR KACDIDEKNI EEIDRFVVSK 600 EDNNKPLDVK VNMKEQEVLI EMQCPYREYI LHDIMDAINN LHLDAYSVES STTEGVLTLT 660 LKSKFRGTAT APLGMIKEAL WKVSGNL

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence Send to blast

MASSWSPKHE KMQKSLSTQL AVAVRSVQWS YGIFWAPSTT QEGVLEWREG YYNGDIKTMK  60
TVQTTMEIKN DKIGVQRSEQ LKELYKFLLV GESDPQTKRP SAALSPEDLS DSEWYYLVCM  120
SFVFYPNQSL PGRALEIGET IWLCNAQYAD SKVFSRSLLA KSASIQQKEI LSDHYIMAVT  180
KISMFILCFK PVFQTVVCFP YLGGVIEIGT TELVPEDPNL IQHVKACLLE FSKPICSDKS  240
SSALNKPDDD KLQPCSNGEH VLVDTKVLEY SCSPAEEIKL DQDPIKELQE DSNMDSPDGC  300
SNGCEHNCRV GESMVEAINN GGPSSQVHFM DDDDALSNGA PDSLSSCDCL SEASENRGKA  360
SKDVQLIRGI QSFNHLNRSS LDAAASDEHL SYTRILSALL GRSSAFKQNP YASNSNCKSS  420
FVKWKKGGIC EQNRLRLEQS LLKKTLFTVP LMHRSFSSIK SMKENETKEW TNRLENADDK  480
FRENVLSDKI RETGNFKILK SSIPHPISEV EKISILGDTI KYLKELETRV EELESYMDMA  540
DSEARTKRKC PDMLEQISDN YEARKVYNKG MRKPWMMNKR KACDIDEKNI EEIDRFVVSK  600
EDNNKPLDVK VNMKEQEVLI EMQCPYREYI LHDIMDAINN LHLDAYSVES STTEGVLTLT  660
LKSKFRGTAT APLGMIKEAL WKVSGNL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.6VX3K

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015947391.1	0.0	transcription factor EGL1 isoform X1
TrEMBL	A0A445EIY0	0.0	A0A445EIY0_ARAHY; Uncharacterized protein
STRING	GLYMA07G07740.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2444	34	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.3	1e-122	bHLH family protein