PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.74C4V
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 223aa    MW: 25876.6 Da    PI: 10.081
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.74C4VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.85.1e-1086177595
                  -..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
           B3   5 ltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                   ++++ +k +r+++  +fa+     gg+  e+ + t++  +  +++++ +  +k+++r y ++  Wk+Fvk ++L+ g  +vF+ +++  ++ +v+
  Aradu.74C4V  86 RLTEYDMKADRFYIRCEFARLLlksGGS--EQWKFTVKGsKITKTFTMHVLKSKGKNReYKIGPKWKDFVKMHKLRPGYLCVFRSVSN--KNHLVQ 177
                  458899999**********777876555..345666666356699***99775555556*************************5544..333555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.12E-1182179IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.9E-982180IPR015300DNA-binding pseudobarrel domain
PfamPF023621.1E-787176IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MDFYAFHYVK DIVDISLLKL IQDELGLNYF DGLDDVSYDI EDNEMHRNMK SSGVQRIQTN  60
TSNGTTVKKR SITKKRGCVA EHYSKRLTEY DMKADRFYIR CEFARLLLKS GGSEQWKFTV  120
KGSKITKTFT MHVLKSKGKN REYKIGPKWK DFVKMHKLRP GYLCVFRSVS NKNHLVQKFQ  180
NIKDDRKSRV SGLEEKKKSL DERGELEEGG ETRPVSTNAA DPA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.74C4V
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015965608.11e-131uncharacterized protein LOC107489370
TrEMBLA0A445D6299e-42A0A445D629_ARAHY; Uncharacterized protein