PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.75PY6
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRF
Protein Properties Length: 562aa    MW: 61079.3 Da    PI: 7.8711
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.75PY6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.82.2e-24217261145
          WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                  d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e 
  Aradu.75PY6 217 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 261
                  79****************************************985 PP
2QLQ613.3e-21147182237
          QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                   FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k
  Aradu.75PY6 147 LFTPSQWMELEHQALIYKYITANVPVPSHLLIPITK 182
                  6********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009517.8E-12146182IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.659147182IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.7E-15148180IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.847217261IPR014977WRC domain
PfamPF088791.1E-20218260IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MDLGVVGFDG LVGSEAGFVP FGSGFLKHQR SEEENHQRNN NNNSSCCNVL LRSNNNNNNG  60
NDNVAIALFK QEGEEKMLSF STTPTPKSET LIVEKASSNA TLHTSYHPFS SYNINNNAGY  120
NNSNWGMMMM GNSSSNNNVG RVVGGALFTP SQWMELEHQA LIYKYITANV PVPSHLLIPI  180
TKALHSTSPF SNFPNPLLRP NPLGWGGFHL GFSSSTDPEP GRCRRTDGKK WRCSRDAVVD  240
QKYCERHMNR GRHRSRKPVE GQSGHAAAVT TTTTTTTTTS NSKLLLPNSN NSSSSFSIVG  300
NTASNNNSNT ISFGNCHEHK NVIQQQQPVA SDASAANNIS RMFMKKENNN ANESCSLLPM  360
LPPKENPFMI HNNHHEFGVV TCDSLLNPSS NNKSNDSQNN SLRHFIDEST QLSISIPNHQ  420
FMPTNEKVTL SPLRVSSSRE LELELVDPIQ MGLGVGIGVN NNNNNNIVRQ PNWIPISWES  480
SMGGPLGEVL NLNNNNNNNN NNNNNNKGSL NLISSDGWDN SPSIGSSPTG VLQKTTAFGS  540
LSNSSAGSSP RAADNNKGGA IL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.75PY6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972413.10.0growth-regulating factor 7
TrEMBLA0A445CXM90.0A0A445CXM9_ARAHY; Uncharacterized protein
STRINGXP_004498953.11e-148(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20853481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.12e-57growth-regulating factor 2