PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.77XDI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 401aa    MW: 44863.4 Da    PI: 5.8691
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.77XDIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12335380655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR +i +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  Aradu.77XDI 335 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 380
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.288329379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-16332391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.09E-12333384No hitNo description
Gene3DG3DSA:4.10.280.107.5E-16334390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9335380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-14335385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MESDLQAPSS NGLTRYRSAP SSYFTDIIDR EFYEHIFNRP SSPETERVFS RFMNSLRDDA  60
APEDDSLHLD SSSVKEEHDI TPSQPLLFQH QQQQQQNNVN SFNYQSTSRP PLPNQNQNLA  120
SSGGVEGVYS NNNNNNNRLP QMKNQSNLVR HSSSPAGLFS QIHIENGYVV DMRGMGTLGA  180
VNKSVEEVKF SSSRTRRLKN PQNYSSSASG RMSSIAEIGN RDSREDNPDA EAFGETHGED  240
FITEFAPWDD SVAVNDIVAG LKRFRDDDVK PFSSGLNAAE TQNESRGQQA APLAHQMSLP  300
NTSAEMAAIE KFLQFSDSVP CKIRAKRGCA THPRSIAERV RRTKISERMR KLQDLVPNMD  360
KQTNTADMLD LAVDYIKDLQ KQVETLSDCQ AKCTCSSKPQ Q
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.77XDI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0954351e-116BT095435.1 Soybean clone JCVI-FLGm-25M5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935498.10.0transcription factor bHLH122
RefseqXP_015935499.10.0transcription factor bHLH122
TrEMBLA0A445BVG20.0A0A445BVG2_ARAHY; Uncharacterized protein
STRINGGLYMA15G03740.41e-171(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.13e-69bHLH family protein