PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.78U2V
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 144aa    MW: 16294.4 Da    PI: 8.0721
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.78U2VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.61.3e-1551137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kf ++YAk vGFs+r+++++++   +ei+++  +Cs+egk +++ +    +++t++++  +  a++ ++  k  g w ++k++l+H+H+ +p
  Aradu.78U2V  51 KFHRNYAKAVGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTSSLNFPARIYIHTLKdVGAWIISKVVLDHSHSYCP 137
                  699**************98887..8889*************999877...899999************998879**************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.1E-1351137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MDDSTSNCQL NQGEVDYEFE SNEVPEPFSV VDDQFVLKVG MTFTTLEDAG KFHRNYAKAV  60
GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTSSLNFPAR IYIHTLKDVG  120
AWIISKVVLD HSHSYCPSKA EMLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.78U2V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-145HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.17e-88protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997160.12e-88protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.11e-87protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YPX93e-96A0A444YPX9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32250.35e-10FAR1-related sequence 2