PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7E2JG
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 359aa    MW: 39077.1 Da    PI: 7.6704
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7E2JGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.65.4e-3875132461
       zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                   alkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rkn+++
  Aradu.7E2JG  75 LALKCPRCESTHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNNTN 132
                  5789**************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-2564127IPR003851Zinc finger, Dof-type
PfamPF027011.4E-3276131IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.85477131IPR003851Zinc finger, Dof-type
PROSITE patternPS01361079115IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010067Biological Processprocambium histogenesis
GO:0010087Biological Processphloem or xylem histogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MGFSSLHVCM DSSASDNNWL QGTINEEGST GVDDSSCPSP TGDMMMIACS NKLPTMIIEG  60
SSSRRLMTRP PQDQLALKCP RCESTHTKFC YYNNYSLSQP RYFCKSCRRY WTKGGTLRNI  120
PVGGGCRKNN TNKKSSSNSS KKSSNNNDNN DQPSPLPISV NINNQNQPHY PSNNGGFPDL  180
HQFSSNMNSL FGMSSIGGGL LGNPNFMFEN NARPLDFMME SGIIKSGSRS FDFIGNSDHH  240
HHLMMNGGGY NLMTSSSSPN YQGLCSSAFG GNNNNMSLDG GNNHNNNSNN TGSYNIMGSC  300
QRLMLPYDDS GDNGNQNSLI DVKPNPRQLL PLDGKETFGS WTTTGMINSY GSSATNPLV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00580DAPTransfer from AT5G62940Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7E2JG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015967937.10.0dof zinc finger protein DOF5.6
RefseqXP_025603463.10.0dof zinc finger protein DOF5.6
TrEMBLA0A445EPX40.0A0A445EPX4_ARAHY; Uncharacterized protein
STRINGXP_007138074.12e-85(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50923456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.17e-41Dof family protein