PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.7K2S3

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 968aa MW: 108153 Da PI: 6.3365

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.7K2S3	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.8	4.4e-28	639	688	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k+i+l++l+++F++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ Aradu.7K2S3 639 KTITLQVLRQHFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKV 688 89**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.439	627	708	IPR003035	RWP-RK domain
Pfam	PF02042	6.4E-25	640	688	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.2E-22	866	955	No hit	No description
Gene3D	G3DSA:3.10.20.240	7.1E-22	869	950	No hit	No description
PROSITE profile	PS51745	26.311	872	955	IPR000270	PB1 domain
SMART	SM00666	9.5E-23	872	955	IPR000270	PB1 domain
Pfam	PF00564	1.3E-18	873	953	IPR000270	PB1 domain
CDD	cd06407	1.81E-39	874	953	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 968 aa Download sequence Send to blast
MRDGGVLSSG TMLEPTPPPP PPPLPPPPAP PPTTTTSISV DYDYINELFV DGCWLAASSS 60 AAAAADGSAD FYVPSPSFSN PIFDPFSWPC LDTEQIESQA REREQEHEKQ EQPPPFSHDL 120 VVAANSCSRN QQQQYHHYEN QSVENNNPNP NNPSEFFRRW WIAPSSNPGP GSYVVEKLLK 180 ALMCIKDVNR NKDMLIQIWI PVMNRGGTQI LRTNGLPFSL ESRSVNLAKY REISEVYQFS 240 AEEDSKELVP GLPGRVYKEK VPEWTPDVRF FRSYEYPRVD HAQVYDVRGS LALPIFEQGS 300 KNCLGVVEVV MTQQKINYRP ELESVCQALE AVNLTSSKLP TIQNVKVKME KKKKKNHLRH 360 TSCEKSYETA LPEIQEVLRS ACEIHKLPLA QTWIPCIKQG KEGCRHSEDN YPHCISPVEH 420 ACYVGDPSIQ VFHEACSEHH LLKGQGVAGG AFMTNQPCFA PDITLLSKTD YPLSHHARMF 480 GLRAAVAIRL RSIYNSSDDF VLEFFLPLEC IDNDEQKKML TSLSLIIQRV CHSLRVISDK 540 ELEEETDFSV EEVIAHEDSG TFASAAAWPE PLQSQIVASL GAQEKSSETM GTSFSDQRQQ 600 QQESSVLKGN LDSNGECSTY NVGNLSSKTG DKKKSKVDKT ITLQVLRQHF AGSLKDAAKN 660 IGVCTTTLKR ICRQHGIKRW PSRKIKKVGH SLQKLQLVID SVQGASGAFQ IDSFYSKFPD 720 LAASPNLSGT SLFSNLKQCD NNPNSLSIQP DPGSLSPEGA SKSPSSSCSQ SSISSHPCSS 780 MAEQQNHHLT NNNFDSSKDQ MVLLVGENSS GDGLLKRIRS EAELKSLNED RVKIVMPRSQ 840 SQETLGQHNV QNGHHGSLSR TKSKGTQKED AAYRVKVTYG DEKARFKMPK NWGYEDLVQE 900 VGRRFCISDM SKFDVKYLDD DYEWVLLTCD DDLEECIEVC QSSESTTIKL CLQLSNTNHS 960 MRNPLEFR

Sequence ? help Back to Top

Protein Sequence Length: 968 aa Download sequence Send to blast

MRDGGVLSSG TMLEPTPPPP PPPLPPPPAP PPTTTTSISV DYDYINELFV DGCWLAASSS  60
AAAAADGSAD FYVPSPSFSN PIFDPFSWPC LDTEQIESQA REREQEHEKQ EQPPPFSHDL  120
VVAANSCSRN QQQQYHHYEN QSVENNNPNP NNPSEFFRRW WIAPSSNPGP GSYVVEKLLK  180
ALMCIKDVNR NKDMLIQIWI PVMNRGGTQI LRTNGLPFSL ESRSVNLAKY REISEVYQFS  240
AEEDSKELVP GLPGRVYKEK VPEWTPDVRF FRSYEYPRVD HAQVYDVRGS LALPIFEQGS  300
KNCLGVVEVV MTQQKINYRP ELESVCQALE AVNLTSSKLP TIQNVKVKME KKKKKNHLRH  360
TSCEKSYETA LPEIQEVLRS ACEIHKLPLA QTWIPCIKQG KEGCRHSEDN YPHCISPVEH  420
ACYVGDPSIQ VFHEACSEHH LLKGQGVAGG AFMTNQPCFA PDITLLSKTD YPLSHHARMF  480
GLRAAVAIRL RSIYNSSDDF VLEFFLPLEC IDNDEQKKML TSLSLIIQRV CHSLRVISDK  540
ELEEETDFSV EEVIAHEDSG TFASAAAWPE PLQSQIVASL GAQEKSSETM GTSFSDQRQQ  600
QQESSVLKGN LDSNGECSTY NVGNLSSKTG DKKKSKVDKT ITLQVLRQHF AGSLKDAAKN  660
IGVCTTTLKR ICRQHGIKRW PSRKIKKVGH SLQKLQLVID SVQGASGAFQ IDSFYSKFPD  720
LAASPNLSGT SLFSNLKQCD NNPNSLSIQP DPGSLSPEGA SKSPSSSCSQ SSISSHPCSS  780
MAEQQNHHLT NNNFDSSKDQ MVLLVGENSS GDGLLKRIRS EAELKSLNED RVKIVMPRSQ  840
SQETLGQHNV QNGHHGSLSR TKSKGTQKED AAYRVKVTYG DEKARFKMPK NWGYEDLVQE  900
VGRRFCISDM SKFDVKYLDD DYEWVLLTCD DDLEECIEVC QSSESTTIKL CLQLSNTNHS  960
MRNPLEFR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.7K2S3

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015934088.1	0.0	protein NLP4 isoform X1
Refseq	XP_015934089.1	0.0	protein NLP4 isoform X1
Refseq	XP_015934090.1	0.0	protein NLP4 isoform X1
TrEMBL	A0A445BRP2	0.0	A0A445BRP2_ARAHY; Uncharacterized protein
STRING	XP_007136019.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1237	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein