PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.7K34L

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 189aa MW: 21980.7 Da PI: 10.0976

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.7K34L	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.5	3.9e-12	52	137	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 kfY++Y+k + Fs+++++++++ ++i+++ +Cs+e k +++ + + +t+++ ++C a++ v++ k g w + k++l+ +H+++ Aradu.7K34L 52 KFYKDYSKLASFSTKIKNTTRK--GDKIKNQLITCSREEKWKSKISP---TLKTNPSAPINCPARIYVHLLKdIGLWIIFKVVLNDSHSCC 137 6**************98776..8889******999998766...999************99989***********9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.0E-9	52	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence Send to blast
MGKLVERNGD MSSGEFKITS SLLDFNSSRC VVDEQFVPKV RMTFKTLEEV RKFYKDYSKL 60 ASFSTKIKNT TRKGDKIKNQ LITCSREEKW KSKISPTLKT NPSAPINCPA RIYVHLLKDI 120 GLWIIFKVVL NDSHSCCLDR AEMLKQHKEL SMFVCRTIDT MRKSGSDQSY LKIVIYEFQF 180 IWITIFGPR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.7K34L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016206076.1	6e-75	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445DEK3	1e-101	A0A445DEK3_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	3e-06	FAR1-related sequence 4