PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7M5UC
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 195aa    MW: 22051.1 Da    PI: 4.8788
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7M5UCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.31e-091446132
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32
                     rg+W++eEd++l+++++++G+g +W + +++ g
      Aradu.7M5UC 14 RGPWSPEEDLKLKEYIHKHGTGgNWIALPQKAG 46
                     89***********************98888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.7E-11544IPR009057Homeodomain-like
SuperFamilySSF466896.32E-7846IPR009057Homeodomain-like
PROSITE profilePS500906.76944IPR017877Myb-like domain
PfamPF002492.2E-81445IPR001005SANT/Myb domain
CDDcd001674.65E-51640No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MGRAPCCDKA NVKRGPWSPE EDLKLKEYIH KHGTGGNWIA LPQKAGLVDP ISLPSTEYYA  60
NTTTTSVPFY QHQVDSIVSP SSMQQNYHMF GSEGSCSSSD NGSSIKQEEI GYHHQGSYNN  120
IIAFDEFNNN NDHHHHNNKF LLMPSSFNDN NSNSIVNYDG GENITEYDLE EIKQLISVSS  180
SVDEIKEEKP IYYYY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7M5UC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150403e-36AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025684745.14e-80transcription factor RAX2
TrEMBLA0A445E5069e-79A0A445E506_ARAHY; Uncharacterized protein
STRINGPGSC0003DMT4000209793e-29(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13034340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.13e-26MYB family protein