PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7R439
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 377aa    MW: 43718.8 Da    PI: 8.5391
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7R439genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.41e-15174220148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g W+++Ed ll ++v+++G ++W+ Ia  +  gR +kqc++rw+++l
      Aradu.7R439 174 KGQWSADEDMLLTQLVELFGFKNWTYIATLIS-GRIGKQCRERWFNHL 220
                      799*****************************.*************97 PP
2Myb_DNA-binding56.27.9e-18226268145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +++W +eEd+ll++a+kq G++ W+ Iar+++ gRt++ +k++w+
      Aradu.7R439 226 KDSWDEEEDKLLIEAHKQVGNK-WAEIARRLP-GRTENTIKNHWN 268
                      679*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.206169220IPR017930Myb domain
SuperFamilySSF466894.21E-30172267IPR009057Homeodomain-like
SMARTSM007173.0E-12173222IPR001005SANT/Myb domain
PfamPF002492.7E-14174220IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.5E-25175227IPR009057Homeodomain-like
CDDcd001672.45E-11177220No hitNo description
PROSITE profilePS5129425.175221275IPR017930Myb domain
SMARTSM007178.0E-16225273IPR001005SANT/Myb domain
PfamPF002491.1E-15226268IPR001005SANT/Myb domain
CDDcd001674.67E-12228268No hitNo description
Gene3DG3DSA:1.10.10.601.2E-21228274IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MEFNQNFFED FTYLSGTIYE NPCIKTEIST MVPMQQKSLL VYPPLKNEIL YKNDFHHLQS  60
LKDITNTFCS MAFVPNKNQV EDIHAFPNNH NSLWDLSQKN QVQIDDAFVP SLIYDASLLV  120
PMNFKLQDEL STLTPTENAH WNNIQNPFLN NQMPQKKGLR RKGNIQQSVT EIIKGQWSAD  180
EDMLLTQLVE LFGFKNWTYI ATLISGRIGK QCRERWFNHL QPDIKKDSWD EEEDKLLIEA  240
HKQVGNKWAE IARRLPGRTE NTIKNHWNAA KRKKSSKRQP RKKKNQTYFG ESLLERYVKE  300
VTAADAAKKQ LKKSMKQLKI KNEDYNLQQN ACITGYGGNI PVKFSSNEIG NGSVLIDGTE  360
NYVPMELDMI GIEAYMN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A3e-411712741104MYB PROTO-ONCOGENE PROTEIN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7R439
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015971510.20.0transcription factor MYB98
RefseqXP_025607378.10.0transcription factor MYB98
TrEMBLA0A445CUP40.0A0A445CUP4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15703196
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.17e-53myb domain protein 118