PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7YJ00
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 645aa    MW: 73550.9 Da    PI: 8.7956
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7YJ00genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.5e-08456497240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      ++W++eE +ll ++ +++++g   +W+ I++++g+gR+  ++
      Aradu.7YJ00 456 KPWSKEEIDLLRKGMQKYPKGtsrRWEVISEYIGTGRSVDEI 497
                      69***********************************98765 PP
2Myb_DNA-binding26.91.1e-08588631344
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 
                       W++  +  lv+a k ++++   +W+++a  ++ g+t +qck ++
      Aradu.7YJ00 588 VWSAVQERALVQALKAFPKEtnqRWERVATAVP-GKTVNQCKKKF 631
                      6********************************.********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR006251.2E-84866IPR001623DnaJ domain
SuperFamilySSF465658.77E-2064171IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1103.6E-2189194IPR001623DnaJ domain
SMARTSM002716.5E-1492167IPR001623DnaJ domain
PfamPF002261.4E-1793172IPR001623DnaJ domain
CDDcd062572.30E-1293164IPR001623DnaJ domain
PROSITE profilePS5007618.27393175IPR001623DnaJ domain
PRINTSPR006251.2E-8116131IPR001623DnaJ domain
PRINTSPR006251.2E-8147167IPR001623DnaJ domain
PROSITE patternPS006360152171IPR018253DnaJ domain, conserved site
PROSITE profilePS500906.644450505IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.9E-5450497IPR009057Homeodomain-like
SuperFamilySSF466891.05E-7450499IPR009057Homeodomain-like
SMARTSM007178.4E-7454507IPR001005SANT/Myb domain
PfamPF002496.8E-7456497IPR001005SANT/Myb domain
CDDcd001679.71E-5457499No hitNo description
PROSITE profilePS512939.351584639IPR017884SANT domain
Gene3DG3DSA:1.10.10.603.1E-5585631IPR009057Homeodomain-like
SMARTSM007174.7E-9585637IPR001005SANT/Myb domain
SuperFamilySSF466896.58E-9587641IPR009057Homeodomain-like
PfamPF002497.2E-7588631IPR001005SANT/Myb domain
CDDcd001676.76E-6589635No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    Send to blast
MAVHSEYRLI GYSEEIVDGQ PIFVSSNCLP IKAVKYEPAG HAFHSAALKL LGVRENNEDP  60
DSKKVVDDKE PTSLPSDSYS SKSKKKAGDK QQDHYALLGL SHLRYLASED QIRKSYRETA  120
LRFHPDKQAA LLLAEETETA KQAKKDEIES HFKAIQEAYE VLIDPVKRRI YDSTDEFDDE  180
IPTDCAPQDF FKVFGPAFMR NGRWSVSQPI PSLGDDNTPL KEVDDFYNFW YSFKSWREFP  240
HADEFDLEQA ESRDHKRWME RQNAKLSEKA RKEEYARIRS LVDNAYKRDP RILRRKEEEK  300
AEKQRKKEAK IMAKRMQEEE AARIAEEEKR RKEEEEKRAA EVASQQKKVK EKEKKLLRKE  360
RTRLRNLSGP ILSQQLLGIS DDDVEKLCMS FDIEKLRGLC EKMEGKQVVD QAEVLRDALS  420
CKKDETDKKE ERSIQQNGAV KVNGSVSLSN IEKKEKPWSK EEIDLLRKGM QKYPKGTSRR  480
WEVISEYIGT GRSVDEIMKA TKTVLLQKPD SAKAFDAFLE KRKPAAQSIA SPLSTREELE  540
GVSIPAKPEN SAAATTNNSE DSNSNQTSGS APSPAAANGV SSSSEQDVWS AVQERALVQA  600
LKAFPKETNQ RWERVATAVP GKTVNQCKKK FALMKESFRS KKSAV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A6e-2018929220123Zuotin
5dje_B6e-2018929220123Zuotin
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7YJ00
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958810.10.0dnaJ homolog subfamily C member 2
TrEMBLA0A444ZC280.0A0A444ZC28_ARAHY; Uncharacterized protein
STRINGXP_007148540.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60833348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.10.0DnaJ domain ;Myb-like DNA-binding domain