PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.81YZS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 415aa    MW: 47319.4 Da    PI: 8.7628
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.81YZSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.15.8e-1851137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r+++++++   +ei+++  +Cs+egk + + +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.81YZS  51 KFYRNYAKVAGFSTRVRSTNRK--GNEIKNQLITCSREGKWKYKISP---TEKTNPTVGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 137
                  6****************98887..8889**************99877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.3E-1551137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MDHSISDCQL NPGEVDYEFE SNEVPEPLSV VDDELVSKVG MTFTTLEDAG KFYRNYAKVA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGKWK YKISPTEKTN PTVGLNCPAR IYIHTLKDVG  120
AWIISKVVLD HSHPCCPSKA EMLKQHRELN MSICHLYEDR HIWVPIYLDH HFWAGMRSTQ  180
RSESMHSFFN KYITRNNSLI QFVKQYDNCL GSREQAERES DAADFHTVIP CATKSSIEAQ  240
FQDAYTHTKF REVQAQFRGK ANCITRLKNS ALGYSIYEVG EQVSSSIFNK FAVTYDSVAA  300
EELTGFLHHA YDNAMAKMEA LKAKRKGTSS LSHEDANLES VNELQSPPRI RTRGHPKNRL  360
GSKLEKQITN ATKKKKTKVL SEINLFDAAS AAHSNCSQYQ GHVINYQFRA VYQHR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.81YZS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-180HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982377.11e-106protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CSB70.0A0A445CSB7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-17FAR1 family protein