PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.8D7HR
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 104aa    MW: 12481.4 Da    PI: 9.3735
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.8D7HRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.43e-103405490
         FAR1 54 traetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                 +r+ tr+gC a++kv+ ++ +g+w v+k+  eHnHe+ 
  Aradu.8D7HR  3 PRPITRCGCGAQIKVHVDQsTGRWFVEKFCDEHNHEML 40
                 6889*************999***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.0E-7340IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MDPRPITRCG CGAQIKVHVD QSTGRWFVEK FCDEHNHEML DARFRGLLHS HRVIKEGDMH  60
QINLMRKVGM RVPTIFRHFQ HYLEFMRRRE LVADYRSVYG QSHC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.8D7HR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205287.11e-44protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020972915.12e-45protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025627812.11e-44protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445A2K58e-48A0A445A2K5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-10FAR1-related sequence 5