PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.8E15S

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 222aa MW: 25216.5 Da PI: 8.7898

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.8E15S	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.7	7.8e-13	51	117	1	72
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 kfY++YAk +GFs+r++ ++++ ++ei+++ +Cs+egk +++ + +++t+++t ++C a++ ++ k Aradu.8E15S 51 KFYRNYAKAAGFSTRVRCTNRK--ENEIKNQLITCSREGKWKSKISP---TEKTNPTTGVNCPARIYIHTLK 117 6*************988776..7779*********998877...999************99765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.9E-10	51	116	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence Send to blast
MDHSTSDCQL NPGEVDYEFE SNEVPEPLSV VDDELVPKVG MTFTTLEDAG KFYRNYAKAA 60 GFSTRVRCTN RKENEIKNQL ITCSREGKWK SKISPTEKTN PTTGVNCPAR IYIHTLKDVG 120 MRSTQRSESM HSFFNKYITR NSSLIQFVKQ YDNCLGSREQ AERESDAADF HTVIPCATKS 180 SIEAQFQDAR GKMPMLIIRV ERDTVPSRTK RVKLRTSKPS VS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.8E15S

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-102	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997160.1	7e-78	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997362.1	9e-78	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Z793	1e-117	A0A444Z793_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-07	FAR1 family protein