PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.8JQ1E
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-X1
Protein Properties Length: 1135aa    MW: 124207 Da    PI: 8.0646
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.8JQ1EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X123.98.8e-08325343119
     zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                  CG+H+C+++CH G C+pC+
  Aradu.8JQ1E 325 CGRHRCERICHVGACDPCQ 343
                  ******************6 PP
2zf-NF-X1201.5e-06389406118
     zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                  CG+H C+++CH+G C++C
  Aradu.8JQ1E 389 CGNHMCNEICHPGSCGEC 406
                  ****************** PP
3zf-NF-X116.91.4e-05447464118
     zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                  CG H C++ CH G+CppC
  Aradu.8JQ1E 447 CGTHHCKEVCHVGDCPPC 464
                  ****************** PP
4zf-NF-X1186.1e-06543561119
     zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                  CG+H C++lCH G CppC 
  Aradu.8JQ1E 543 CGQHACESLCHSGHCPPCL 561
                  ******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578504.24E-7148217No hitNo description
PROSITE profilePS500168.716155216IPR019787Zinc finger, PHD-finger
PROSITE profilePS500899.553158214IPR001841Zinc finger, RING-type
PROSITE patternPS013590158213IPR019786Zinc finger, PHD-type, conserved site
CDDcd060082.39E-5247308No hitNo description
SMARTSM004380.023270288IPR000967Zinc finger, NF-X1-type
PfamPF014228.5272287IPR000967Zinc finger, NF-X1-type
CDDcd060088.54E-12315363No hitNo description
PfamPF014224.4E-6325342IPR000967Zinc finger, NF-X1-type
SMARTSM004381.0E-4325344IPR000967Zinc finger, NF-X1-type
CDDcd060083.41E-8379422No hitNo description
PfamPF014229.2E-4389406IPR000967Zinc finger, NF-X1-type
SMARTSM004389.7E-4389408IPR000967Zinc finger, NF-X1-type
CDDcd060085.41E-13437485No hitNo description
PfamPF014222.1E-4447464IPR000967Zinc finger, NF-X1-type
SMARTSM004382.6E-4447466IPR000967Zinc finger, NF-X1-type
PfamPF0142219505515IPR000967Zinc finger, NF-X1-type
SMARTSM00438170505539IPR000967Zinc finger, NF-X1-type
CDDcd060081.64E-8533576No hitNo description
PfamPF014221.2E-4543560IPR000967Zinc finger, NF-X1-type
SMARTSM004384.1E-4543562IPR000967Zinc finger, NF-X1-type
CDDcd060082.39E-5590638No hitNo description
SMARTSM004382.8600618IPR000967Zinc finger, NF-X1-type
PfamPF0142215608617IPR000967Zinc finger, NF-X1-type
PfamPF014220.4653673IPR000967Zinc finger, NF-X1-type
SMARTSM004380.42653674IPR000967Zinc finger, NF-X1-type
CDDcd060082.81E-5681730No hitNo description
PfamPF0142226685711IPR000967Zinc finger, NF-X1-type
SMARTSM004380.076692713IPR000967Zinc finger, NF-X1-type
Gene3DG3DSA:3.30.70.3302.9E-6925982IPR012677Nucleotide-binding alpha-beta plait domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1135 aa     Download sequence    Send to blast
PSIEVLTSHE EPKNVENLHF SSNRLRKTLD YINKQTHPKV KGRKTLFLAQ NPHIQAHQND  60
THHIVVSSSL FSLHRQLRET GGVGPEFRRK VVHVKNGFPE DHLPLLLSNH GAVNQRREVE  120
KGRSSGNQAG KGLKMRDSSL PQLVQEIQEK LMKGTVECMI CYEMVRRSAL VWSCSSCYSI  180
FHLNCIKKWA RAPTSIDLSA EKNQGFNWRC PGCQSVQLTS SKEIRYVCFC GKRVDPPSDL  240
YLTPHSCGEP CGKPLEKEVF SNGGSKEDRC PHVCVLQCHP GPCPPCKAFA PPRLCPCGKK  300
TITTRCFDRQ SVLTCGQRCE KLLECGRHRC ERICHVGACD PCQVLINASC FCSKKVEVLP  360
CGDMTMKGEF TAEAGVFTCG SNCGRKLSCG NHMCNEICHP GSCGECDLLP RHVNTCCCGK  420
TKLDEERKSC LDPIPTCSQV CAKSLPCGTH HCKEVCHVGD CPPCLVLVSQ KCRCGSTSRI  480
VECYKTTAEN EKFTCEKPCG RKKNCGRHRC SERCCLLSNP NNNLSSEWDP HFCSMPCEKK  540
LRCGQHACES LCHSGHCPPC LETIFTDLTC ACGRTSIPPP LPCGTPPPSC QLPCSVPQPC  600
GHIALHSCHF GDCPPCSVPV AKECIGGHVV LRNIPCGSKD IRCNKLCGKT RQCGLHACGR  660
TCHPPPCDNL SCSVQGLPAP CGQTCGAPRR DCRHTCTAPC HPSTPCPDVR CEFPVTITCS  720
CGRITANVPC DAGVSSSNYN ADAVHEASIT QKLPIPLQPV DPNGKKVPLG QRKLMCDDEC  780
AKLERKRVLA DAFDITTPNL DSLHFGDNSV DLISDLYRRD PKWVISVEER CKFLVLGKSR  840
STTHGLKVHV FCPMLKEKRD AVRVIADRWK LAVSAAGWEP KRFIVIHVTS KSKAPTRVLG  900
VKGTPTISAP LPPAFDHMVD MDPRLVVSFP DLPREADISA LVLRFGGECE LVWLNDKNAL  960
AVFHDPARAA TAMRRLDHGT FYQGAVSVVP NVGATTTSST TGAWGAGTTK EGALSVLKGN  1020
AWKKAVVQES SWREDSWGDE EWTTGSANVQ QSAWKKEAPI AASFNRWNLL DHESGQSSSS  1080
TNVKKAEASG KNTESSAVLR LESHAAGSNE QGKLGGNLDA TEASEVVDDW EKAYE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.8JQ1E
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966873.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A444Z1F20.0A0A444Z1F2_ARAHY; Uncharacterized protein
STRINGXP_004512772.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69723145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1