PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.92HAJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 205aa    MW: 23958.7 Da    PI: 5.634
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.92HAJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.57.5e-2088148259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+  +s++ rsYY+C ++   +C++ k+v+r +edp +  +tY g+H+++
  Aradu.92HAJ  88 EDGHAWRKYGQKKTINSNYLRSYYKCIYKnekDCKAIKHVQRIQEDPPLYRTTYYGHHTCK 148
                  8**************************998889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.8E-2282148IPR003657WRKY domain
PROSITE profilePS5081118.60182150IPR003657WRKY domain
SuperFamilySSF1182901.7E-2084148IPR003657WRKY domain
SMARTSM007746.2E-2987149IPR003657WRKY domain
PfamPF031063.1E-2188148IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MENNNEVSKA TMMEQEIMRG RDMANQLLQV VVDSRNEEEI ERSTVMPFAE DAVRKVLRSF  60
TNTLLLLNNE DTKETAPSWQ SDSSILCEDG HAWRKYGQKK TINSNYLRSY YKCIYKNEKD  120
CKAIKHVQRI QEDPPLYRTT YYGHHTCKCS LITYPHTRLE PASSFESSML LSFSIVASND  180
RIDHNQSSSS NDYDLLSDYE LYFNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-1688148969OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00619PBMTransfer from AT5G22570Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.92HAJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016168349.21e-136probable WRKY transcription factor 38
TrEMBLA0A4D6NC654e-56A0A4D6NC65_VIGUN; WRKY transcription factor 22
STRINGGLYMA13G34251.11e-55(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126381134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.14e-24WRKY DNA-binding protein 38