PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.97XZI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 296aa    MW: 32798.7 Da    PI: 8.7793
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.97XZIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof112.81.5e-3555111561
       zf-Dof   5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                   l+cprCdstntkfCyynny+ sqPr+fC+aC+r+WtkGG+lrnvPvGggr++++ +
  Aradu.97XZI  55 PLRCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPT 111
                  689***********************************************8777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-2351109IPR003851Zinc finger, Dof-type
PfamPF027014.8E-3156108IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.50356110IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105894IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGLSSKQVSS TGLDWNKALL QSSQNLELPS KITTMKKQQQ QQQQQIQQQQ PILEPLRCPR  60
CDSTNTKFCY YNNYNKSQPR HFCRACKRHW TKGGTLRNVP VGGGRKNKRP TKKSTTTTSI  120
STTTTTTVTT LNGGGGKMEV QPQSNRPLPP PPPPTLYQSM IRPPPLLPQQ NNNNNLSEVK  180
DFGGSEMFLS SSSSALNLPQ SQSLIFPFST ASSSSFDANP CSVSASNIYS YGGEEFKTME  240
ETTINGTNTH LWEIPLPATT TSVAMEMPSN YWGWEDLDPL VSTDLNVPWD DSDIKP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.97XZI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1368298e-59BT136829.1 Medicago truncatula clone JCVI-FLMt-15B3 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943561.10.0dof zinc finger protein DOF3.1
TrEMBLA0A4P1RLN21e-91A0A4P1RLN2_LUPAN; Uncharacterized protein
STRINGGLYMA13G31560.14e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51073356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07640.14e-29Dof family protein