PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9C166
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 125aa    MW: 14477.5 Da    PI: 7.3431
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9C166genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.82.3e-1084124243
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                  fYn+Y++  GF +r+ k+  + + gei+++tfvC+++g+re+
  Aradu.9C166  84 FYNSYSRLKGFATRQGKKVPN-KAGEIVRYTFVCNRQGFREK 124
                  9***************99988.7788*************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.2E-884124IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MVTSRDHRTG LEVMGFEEQD SWVMLVLGAF TGRCDRHEIE AEETIAKCQG KEDLIFHKFN  60
GVEGLQVEDI LKMEFCTPEE ARCFYNSYSR LKGFATRQGK KVPNKAGEIV RYTFVCNRQG  120
FREKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9C166
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992490.11e-62uncharacterized protein LOC110278586
TrEMBLA0A445DVZ16e-66A0A445DVZ1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-08FAR1-related sequence 12