PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.9FW3N

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 474aa MW: 54741.3 Da PI: 8.6596

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.9FW3N	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.4	3.7e-26	214	303	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+Y++ GF+ r+ k+ ++ + gei+++tfvC+++g+re++ + +++r+++++tr+gC a++++k+++ +g+w+v+++++eHnHela Aradu.9FW3N 214 FYNNYSRLKGFTSRRGKTVRN-TAGEIVWYTFVCNRQGFREKKWLEkVDRKREHKVVTRCGCMAEMRIKRKDgSGRWYVSRFVEEHNHELA 303 9**************9998.8888***********997664678888999*******************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.6E-23	214	303	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
NFSNGPDTFI GTLKIHVRSV VGLRRSNIRG NSVGVLRLVV RHRWWVELVA VGREALKVSR 60 CLPAVAFPEG PADKTSNRSV GWWWLLSLCL SHQFSFSSTI AVVSHPSNWQ VETVRMLESC 120 WIVDESVIMA SSSKFWKDAC MWNEPLADYW MEGNGGGSNP QDTMFDTRVE EDAELSDWEG 180 RGASMLPGFL GLDGLRAENV LEMEFSSPQE AGGFYNNYSR LKGFTSRRGK TVRNTAGEIV 240 WYTFVCNRQG FREKKWLEKV DRKREHKVVT RCGCMAEMRI KRKDGSGRWY VSRFVEEHNH 300 ELAYGKLVDY LRSHRKISEV EVAQLTSMRE IGISIPKIYE SFAAQLGGFN LVTFTKQDMY 360 NEIRKQRAHW EAMVNECGVR EVEWVKDLYT KKHAWATAYI RGRFFAGVRT TSRCESLHAK 420 LGRFVESRYG VLEFVRNFQR CVDFLRDIED ELEFRSWYGT PVLQTEFVEL EKSG

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

NFSNGPDTFI GTLKIHVRSV VGLRRSNIRG NSVGVLRLVV RHRWWVELVA VGREALKVSR  60
CLPAVAFPEG PADKTSNRSV GWWWLLSLCL SHQFSFSSTI AVVSHPSNWQ VETVRMLESC  120
WIVDESVIMA SSSKFWKDAC MWNEPLADYW MEGNGGGSNP QDTMFDTRVE EDAELSDWEG  180
RGASMLPGFL GLDGLRAENV LEMEFSSPQE AGGFYNNYSR LKGFTSRRGK TVRNTAGEIV  240
WYTFVCNRQG FREKKWLEKV DRKREHKVVT RCGCMAEMRI KRKDGSGRWY VSRFVEEHNH  300
ELAYGKLVDY LRSHRKISEV EVAQLTSMRE IGISIPKIYE SFAAQLGGFN LVTFTKQDMY  360
NEIRKQRAHW EAMVNECGVR EVEWVKDLYT KKHAWATAYI RGRFFAGVRT TSRCESLHAK  420
LGRFVESRYG VLEFVRNFQR CVDFLRDIED ELEFRSWYGT PVLQTEFVEL EKSG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.9FW3N

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015947585.1	0.0	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Z0I7	0.0	A0A444Z0I7_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-24	FAR1-related sequence 5