PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.9P4TN

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 833aa MW: 94718.8 Da PI: 6.6288

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.9P4TN	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.6	6.3e-21	207	296	3	91
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 Y +YAk +GF vrk s k ++g+i+++ f+C+++g re+++ + +++r++++e rt+C+akl+v ++k kw+ ++l++eHnHelap Aradu.9P4TN 207 YVAYAKGIGFAVRKGDSIKD-EEGNIVRKFFYCNRQGLREKKHYErVDRKRTHKPEMRTNCNAKLVVFLDKsCRKWRTKTLVEEHNHELAP 296 99************9998.7788***********999885667777899**********9989*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.8E-19	207	296	IPR004330	FAR1 DNA binding domain
PROSITE profile	PS50966	10.546	408	444	IPR007527	Zinc finger, SWIM-type
SMART	SM00575	4.0E-4	419	446	IPR006564	Zinc finger, PMZ-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 833 aa Download sequence Send to blast
MSRPLSKLEK LWFILKLCKL LREVAACHPQ RGDWNLCRRF SGEEQKNSGT VGVEPLNSGG 60 WFWISDSPGV PCVCWVASLL FGNGEIWLLF ILILCSYIGM SDSESDLDDG STSGLSGHWT 120 DGWSTDSGDG DDLNGLEEPL TEEGDIGHSD SEYDGRDGGG SYMHAAVEDH ANFENVMGIQ 180 FSYPDPVIAS VLLSVEFNGI GDAYASYVAY AKGIGFAVRK GDSIKDEEGN IVRKFFYCNR 240 QGLREKKHYE RVDRKRTHKP EMRTNCNAKL VVFLDKSCRK WRTKTLVEEH NHELAPQEFT 300 NVMAPHRKIP EGHKAHIHSM HEDGFKTTQI MGFFAHMCDY KTLYSNPVLT TGLEALERSV 360 SKFYTRKIFY EVQKQIEGVG ALLVLHRDSI GGTEKFMFRK YRKSHHVYSV FVDRSCDKYE 420 CSCKLWERLG IPCCHIFCVL KELEKEELPS RLVLRRWCKD AKVADSSSQH ASVNPTDGFR 480 VRYGALWSAC LSLCFTAAQC TKTYNTAMTE VARMSREFES LGGIGQMSSR VQVGADETHI 540 LDPKVSTLSQ MNKRNQRGRR SGSSIRANLW SFNQNDVLRQ LTLADRHDHG VEFVPDRDWS 600 HVALYKSRQT SLRQVCTSLH EPPPVYHKQT YESTTKGTVY RFLVVVPTDS EYSSCSAAGR 660 YSTDEHLAHA AALMRKLLQL HSMVVDDFNH DLLEEEKLVH YETRNALERL RARYRNMASS 720 FRNYRRLNHP EYMSSSSEWR PLSEFFAAIF QYLKFNGDME ETEDSIRDVE SNVPAIDVLG 780 GDSHKQIGEI LQPEEDGNTN CPDFKPECVG VFEVISIDSV TILQVRCRDE AGS

Sequence ? help Back to Top

Protein Sequence Length: 833 aa Download sequence Send to blast

MSRPLSKLEK LWFILKLCKL LREVAACHPQ RGDWNLCRRF SGEEQKNSGT VGVEPLNSGG  60
WFWISDSPGV PCVCWVASLL FGNGEIWLLF ILILCSYIGM SDSESDLDDG STSGLSGHWT  120
DGWSTDSGDG DDLNGLEEPL TEEGDIGHSD SEYDGRDGGG SYMHAAVEDH ANFENVMGIQ  180
FSYPDPVIAS VLLSVEFNGI GDAYASYVAY AKGIGFAVRK GDSIKDEEGN IVRKFFYCNR  240
QGLREKKHYE RVDRKRTHKP EMRTNCNAKL VVFLDKSCRK WRTKTLVEEH NHELAPQEFT  300
NVMAPHRKIP EGHKAHIHSM HEDGFKTTQI MGFFAHMCDY KTLYSNPVLT TGLEALERSV  360
SKFYTRKIFY EVQKQIEGVG ALLVLHRDSI GGTEKFMFRK YRKSHHVYSV FVDRSCDKYE  420
CSCKLWERLG IPCCHIFCVL KELEKEELPS RLVLRRWCKD AKVADSSSQH ASVNPTDGFR  480
VRYGALWSAC LSLCFTAAQC TKTYNTAMTE VARMSREFES LGGIGQMSSR VQVGADETHI  540
LDPKVSTLSQ MNKRNQRGRR SGSSIRANLW SFNQNDVLRQ LTLADRHDHG VEFVPDRDWS  600
HVALYKSRQT SLRQVCTSLH EPPPVYHKQT YESTTKGTVY RFLVVVPTDS EYSSCSAAGR  660
YSTDEHLAHA AALMRKLLQL HSMVVDDFNH DLLEEEKLVH YETRNALERL RARYRNMASS  720
FRNYRRLNHP EYMSSSSEWR PLSEFFAAIF QYLKFNGDME ETEDSIRDVE SNVPAIDVLG  780
GDSHKQIGEI LQPEEDGNTN CPDFKPECVG VFEVISIDSV TILQVRCRDE AGS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.9P4TN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015940831.1	1e-167	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445AIV5	0.0	A0A445AIV5_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF16635	2	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-17	FAR1-related sequence 5