PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9P5WT
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 248aa    MW: 27002.3 Da    PI: 8.2362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9P5WTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.8e-184089255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  ykGVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a++ a++kl+g
  Aradu.9P5WT 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFETSHEAALAYDTAARKLYG 89
                 69****999.**********8...3.35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.13E-293997No hitNo description
PfamPF008476.0E-134089IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-304098IPR001471AP2/ERF domain
PROSITE profilePS5103222.4584097IPR001471AP2/ERF domain
SMARTSM003802.5E-3540103IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-214098IPR016177DNA-binding domain
PRINTSPR003671.2E-94152IPR001471AP2/ERF domain
PRINTSPR003671.2E-96379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MLKSGTMGME ERKQAKKPAQ ASSRKGCMRG KGGPENASCT YKGVRQRTWG KWVAEIREPN  60
RGARLWLGTF ETSHEAALAY DTAARKLYGP DAKLNLPLHH HHHSSSSSSS SSNSPQIHRN  120
HPLINNIITT PPPATPLISS SCNNSVNTAS SMVASLHQQV RPSIYRSDSS SIVSSSLPLD  180
STNNKEEDVL RPFWGSVNDC LPVFDESIWT EAAMSLDFPV IAAAEAATGI YPNANLADVG  240
VWDTPWCM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-194198361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00240DAPTransfer from AT1G75490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9P5WT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933804.10.0dehydration-responsive element-binding protein 2D
TrEMBLA0A445CC751e-155A0A445CC75_ARAHY; Uncharacterized protein
STRINGGLYMA06G03110.14e-82(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-49ERF family protein