PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9P656
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family SRS
Protein Properties Length: 167aa    MW: 18292.8 Da    PI: 9.918
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9P656genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70269.98.3e-22103165360
       DUF702   3 sgtasCqdCGnq.....akkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaas 60 
                  +++++CqdC            C h+RCRtCCksrg++C+thvkstWvpaakr +rqqql a++
  Aradu.9P656 103 TTGINCQDCXXXxxxxxXXXXCPHMRCRTCCKSRGYECKTHVKSTWVPAAKRCKRQQQLMALQ 165
                  67799****875111114578*************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051423.5E-20105166IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016234.9E-16108154IPR006510Zinc finger, lateral root primordium type 1
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MARTPTTVAA TTITLPRSDA TQRRCFNVPQ FQTMERASAP ATTSRDSTSP SIPSSLPPRS  60
PLIGYCAWHS VSRASDEQSL SRSAVMAMRS ATAGEVGGAG SRTTGINCQD CXXXXXXXXX  120
XXXCPHMRCR TCCKSRGYEC KTHVKSTWVP AAKRCKRQQQ LMALQDH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9P656
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025687197.12e-29protein SHI RELATED SEQUENCE 1 isoform X1
RefseqXP_025687206.12e-29protein SHI RELATED SEQUENCE 1 isoform X2
TrEMBLA0A445EAZ48e-76A0A445EAZ4_ARAHY; Uncharacterized protein
STRINGGLYMA16G24510.36e-24(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.12e-22SHI-related sequence 5