PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.9ZQ71

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 125aa MW: 14371.8 Da PI: 10.6466

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.9ZQ71	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.6	4e-08	86	123	1	40
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 kfY +YAk +GFs+r+++++k+ ++ei+++ +Cs+e k Aradu.9ZQ71 86 KFYMDYAKAIGFSTRVQSTNKK--KNEIKNELITCSREEK 123 6**************98887..66799*****9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.2E-5	86	123	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
MVGDSRWVSG SDLDRVKIRL VMVLLRKFRH TSEIELQVLQ VNTLKRASYG IRSGINQKYL 60 GPLGVVDEQF VPKVGMTFNT LKVAAKFYMD YAKAIGFSTR VQSTNKKKNE IKNELITCSR 120 EEKWK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.9ZQ71

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020979233.1	1e-27	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444XTL4	4e-33	A0A444XTL4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477