PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A24GM
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 295aa    MW: 34188.7 Da    PI: 7.2846
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A24GMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.58.1e-2278172190
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fYneY++  GFs+ +sk  +      +g i+++ fvCs++g+r+ ++ + ++++  +r++tr+gC+a++kv+ +  +g+w+v+ ++ eHnH++ 
  Aradu.A24GM  78 DFYNEYGRIKGFSIWRSKVGRCkkaGSEGDIIWQIFVCSRQGERDAKHVHrNDRKMDPRPVTRCGCNARIKVHVDLrNGRWYVDFFSDEHNHDML 172
                  6*************9988766522266789**************9998774677778****************9988***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-1978172IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
VSSNFQENVT AGVEEDPIEN ETFVAETESV PIGASQSDDQ RDVIILDGIG SFGAIDFDAL  60
RAEEIMMIEF VDLKTAYDFY NEYGRIKGFS IWRSKVGRCK KAGSEGDIIW QIFVCSRQGE  120
RDAKHVHRND RKMDPRPVTR CGCNARIKVH VDLRNGRWYV DFFSDEHNHD MLEARFRGMM  180
RSHRAIKMRD LHQINTLRSS GLRVPTIFQA FANQSGGFEM VGFQIGKFIH NGYNLREFIK  240
HFQQYLEFMR RRVVVADYKS AYGEPVVKTR LEELERFAAA VYTREIMERF VGGDR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.A24GM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702767.11e-150protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D6S41e-170A0A445D6S4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-18FAR1-related sequence 5