PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A2E3L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 231aa    MW: 25543.4 Da    PI: 10.4498
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A2E3LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.69.5e-1438115182
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++kl 
  Aradu.A2E3L  38 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKLT 115
                  6***************998776..8889*************998877...8999**************998879*****9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.6E-1138115IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MGVFTVLTRC IVQPLSVVDD ELVPKVGMTF TTLEDAGKFY RNYAKAAGFS TRVRCTNRKG  60
NEIKNQLITC SREGKWKSKI SPTEKTNPTA GLNCPARIYI HTLKDVGAWI ISKLTAILHR  120
AYDNVMAEME ALKGKRKGTS SLSHEDANLE SVNELQSPPR IRTRGRPKNR LGSKLEKQIA  180
NATKKKKTKV LSEINLFDAA SVGHSSCSQY QGQVINYQFR VPAAGDNSLG V
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.A2E3L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-126HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020981492.15e-75uncharacterized protein LOC110273008
TrEMBLA0A445EPZ71e-117A0A445EPZ7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.19e-07FAR1-related sequence 7