PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A3G59
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 288aa    MW: 33657.3 Da    PI: 9.7706
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A3G59genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1362.3e-1150134189
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  kfY++Y+k +GFs+++++++++   ++++++  vCs+e   +++ +    + +t+++   +   ++ v+ +k  g w + k++l+H+H++
  Aradu.A3G59  50 KFYKHYSKLAGFSTKIRNTTQK--GDKVKNQLIVCSREEMWKSKISL---TLKTNPSAGLNYPTRIYVHIMKdVGLWTIFKVVLNHSHPC 134
                  6***************987766..7889***********99998877...889999999999999999999989**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-850135IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MNDSTSNQLN ENNLDYSSET NHADETRCVV DEKFVPKVGM IFKTLEEAGK FYKHYSKLAG  60
FSTKIRNTTQ KGDKVKNQLI VCSREEMWKS KISLTLKTNP SAGLNYPTRI YVHIMKDVGL  120
WTIFKVVLNH SHPCYPDRAE MLRQHRELSM FWFTTAYWFG SFCRAVQGSA YMDSSLPGRR  180
FWGRMRSTQK SESMQAFFNK FITCNSSLRQ FVKQYDNCLA SREQREREFD AADFHTVILY  240
ATKSAIEAQF QHMYTHEKFR EVQAQFRGKM NCITRSVHFT LGFTTAKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.A3G59
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY2377605e-54AY237760.1 Arachis hypogaea clone PM106 microsatellite sequence.
GenBankAY7315985e-54AY731598.1 Arachis hypogaea clone PM449 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945094.11e-107protein FAR1-RELATED SEQUENCE 4-like
TrEMBLA0A444ZLV21e-130A0A444ZLV2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-09FAR1 family protein