PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.A5RQ1

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 307aa MW: 34928.4 Da PI: 8.6366

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.A5RQ1	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.4	2e-17	51	137	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++YAk +GFs+r+++++++ +ei+++ +Cs+e k +++ + +++t+++ +C a++ ++ k + w ++k++l+H+H+++p Aradu.A5RQ1 51 KFYSNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSRERKWKSKISP---TKKTNPTVGLNCPARIYIHTLKdISAWIISKVVLHHSHPCCP 137 6**************98887..8889********9998776...999***********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.4E-14	51	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MNDSTSDCQL NQGKVDFEFE SNKALEPLSV VDNQFVPKVG MTFTTLEDAG KFYSNYAKAA 60 GFSTRVRSTN RKGNEIKNQL ITCSRERKWK SKISPTKKTN PTVGLNCPAR IYIHTLKDIS 120 AWIISKVVLH HSHPCCPSNV EMLKQHRELS MSIRLTIENN EDAGIRPSKT SLIQFVKQYD 180 NCLRSREQAE RESDVADFHT MILYATKSSI ESQFQDVYTH QKFREVQAQF RGKANCITRL 240 TNSALDYSVY EAGEQVSSSI FNKFVVTYDS VAAEIYTGTM EQEGKEVTHT HQEQPRRATV 300 GTKKQEV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.A5RQ1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-179	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020982377.1	1e-105	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YSY6	1e-166	A0A444YSY6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	3e-09	FAR1 family protein