PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A6KUY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family M-type_MADS
Protein Properties Length: 76aa    MW: 8652.11 Da    PI: 7.3551
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A6KUYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.93.5e-1533642051
                 HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51
                 +lKKA+E+SvLCdae a+iifs +gkl+eyss
  Aradu.A6KUY 33 LLKKANEISVLCDAEDALIIFSIKGKLFEYSS 64
                 8*****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.8E-4765IPR002100Transcription factor, MADS-box
PRINTSPR004041.0E-102843IPR002100Transcription factor, MADS-box
SuperFamilySSF554551.02E-113366IPR002100Transcription factor, MADS-box
PfamPF003193.3E-103362IPR002100Transcription factor, MADS-box
PROSITE profilePS5006614.0023366IPR002100Transcription factor, MADS-box
PRINTSPR004041.0E-104364IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MDNKVTKDLS KEDLITLRDE ISKYVIKGNL VRLLKKANEI SVLCDAEDAL IIFSIKGKLF  60
EYSSNPWFVP LHSPSL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.A6KUY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193748.11e-16truncated transcription factor CAULIFLOWER A isoform X1
TrEMBLA0A445ATQ12e-32A0A445ATQ1_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-12AGAMOUS-like 8