PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.A9PZG

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 163aa MW: 18589.9 Da PI: 6.1213

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.A9PZG	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.2	2.4e-17	51	137	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY +YAk +GFs+r+++++++ +ei+++ +Cs+e k +++ + +++t++++ +C ++ ++ k g w ++k++l+H+H+++p Aradu.A9PZG 51 KFYMNYAKAAGFSTRVRSKNRK--GNEIKNQLITCSREEKWKSKISP---TEKTNPTDGLNCPTRIYIHSLKdVGAWIISKVVLDHSHPCCP 137 6*************997776..888********99998776...899***********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.1E-14	51	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MDDSTSDCQL NQGEVDYEFE SNEVPEPLSV VDDQFVPKVG MTFTTLEDAE KFYMNYAKAA 60 GFSTRVRSKN RKGNEIKNQL ITCSREEKWK SKISPTEKTN PTDGLNCPTR IYIHSLKDVG 120 AWIISKVVLD HSHPCCPSKA EMLKQHREQS MSIRRTIENN VEA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.A9PZG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-179	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997266.1	1e-105	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445DSM5	1e-119	A0A445DSM5_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-10	FAR1 family protein