PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A9Z84
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 364aa    MW: 41649.7 Da    PI: 5.622
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A9Z84genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix106.32.1e-33187272187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+k ev aLi++r++m+ +++++  k+plWee+s+ m++ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  Aradu.A9Z84 187 RWPKVEVEALIRLRTSMDAKYQENGPKGPLWEEISSSMKKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 272
                  8*********************************************************************8.99***********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007173.0E-4184246IPR001005SANT/Myb domain
CDDcd122038.31E-28186251No hitNo description
Gene3DG3DSA:1.10.10.601.0E-4186243IPR009057Homeodomain-like
PROSITE profilePS500907.259186244IPR017877Myb-like domain
PfamPF138379.5E-23186273No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MDGRRRRKRK WKDFFHRLMT EVIEKQEDLQ KRFLEAVEKR ERDRMAREES WRLQEMQRIN  60
REREILAQER SIAAAKDAAV MSFLQKIAEQ HNLGQALNNT ISIVQPQPQP QPQPQPQSQP  120
NAPQIPPVPV QQPIPVTQVA VAPVAAQPVA PSAPTVPQQQ QVVTSMEIVK SADNNNGEKL  180
IGGSSSRWPK VEVEALIRLR TSMDAKYQEN GPKGPLWEEI SSSMKKLGYN RNAKRCKEKW  240
ENINKYFKKV KESNKKRPED SKTCPYFHQL DALYREKNKL DMAPKPQSMV APLMVRPEQQ  300
WPPQAMEDAE NDPMERHHDE DDEDEEQEKE TGDEEDEEDE GGGNGNGGNN YEIVGSKAAT  360
ASAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
139RRRRKRK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.A9Z84
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020987707.10.0trihelix transcription factor GT-2
SwissprotQ391171e-85TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A444XTK20.0A0A444XTK2_ARAHY; Uncharacterized protein
STRINGGLYMA02G09060.21e-127(Glycine max)
STRINGGLYMA16G28250.21e-126(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.17e-62Trihelix family protein