PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.AU0UC
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 114aa    MW: 13411.1 Da    PI: 9.5152
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.AU0UCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1301.7e-0949108160
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrt 60 
                  +fY++ +k  GF +r+  + k  ++g+ ++r+f C++eg+r++++ +  +++r +++etrt
  Aradu.AU0UC  49 EFYKRLGKFYGFGIRRGDMFKD-EKGNLVRRRFFCNREGQRDKKHYNrIDRKRPHKPETRT 108
                  6*****************9998.7777****************999943444445666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.5E-749108IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MDVPEAVDIN AMCEEGAGVM GAVDFGDVAD ITENDILRKV FRSEDDAYEF YKRLGKFYGF  60
GIRRGDMFKD EKGNLVRRRF FCNREGQRDK KHYNRIDRKR PHKPETRTIS RRQG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.AU0UC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020981435.14e-69protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020989561.16e-69protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025609953.14e-69protein FAR1-RELATED SEQUENCE 5 isoform X2
TrEMBLA0A445CEJ42e-72A0A445CEJ4_ARAHY; Uncharacterized protein
TrEMBLA0A445CEL72e-71A0A445CEL7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15343210