PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B11G2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 123aa    MW: 14289.3 Da    PI: 7.5954
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B11G2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3314.4e-10531201788
                  E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
           B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                   +pk+f  ++g   +++  + l+ ++g  W++    + ++g++ +++GWkeF++   L+ g ++ F+++++s
  Aradu.B11G2  53 KFPKEFSMKYGDGVPNP--VYLKPPDGTAWKIDW--SEYDGAIQFENGWKEFASYYSLDHGHMMWFEYNKTS 120
                  68*****9**5554565..***************..*******************************98764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.5E-1335121IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.28E-1436120IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.33537123IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MASSSFQRNK HSPSSVICFF KIVLRQSLED GNLVSSFMLI TKTSFILSFE LQKFPKEFSM  60
KYGDGVPNPV YLKPPDGTAW KIDWSEYDGA IQFENGWKEF ASYYSLDHGH MMWFEYNKTS  120
KTL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.B11G2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020987974.18e-70B3 domain-containing protein At3g18960-like
TrEMBLA0A445BPE27e-86A0A445BPE2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-10B3 family protein